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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGGTTCCGAAATGCACTTGCTGTCTTTTTCTACTTGACTATTACACCTTCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttactttacttagagccactcatcccctccacttgcaaatgtaatgctttttctgttttcag

Basic information

species Glycine max
transcript GLYMA01G00430.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213610490|gb|DB958795.1|DB958795
EST:     TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAG                         AATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
genomic: TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttact ... ctgttttcagAATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
EST: gi|213587324|gb|DB965944.1|DB965944
EST:     TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAG                         AATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
genomic: TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttact ... ctgttttcagAATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
EST: gi|213598958|gb|DB971958.1|DB971958
EST:     TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAG                         AATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
genomic: TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttact ... ctgttttcagAATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
EST: gi|16347459|gb|BI973054.1|BI973054
EST:     TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAG                         AATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
genomic: TCCCCATTTTGATTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttact ... ctgttttcagAATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
EST: gi|16996771|gb|BM086143.1|BM086143
EST:     TTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAG                         AATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT
genomic: TTTGATCTGATTGAATTGGCCTCTTGCCAGCAAAACAGgttagttact ... ctgttttcagAATGTGGAAGCTCAAGTTCGCCGAAGGAGGGAATCCATGGCTTCGGACATT