1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CGACGTGCCGCCCTGCGCCACGCTGATCGAGGCGGTGCGCGCCATCAAGCCCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAGgtgagagcgccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttaggggggttctggtgtgcaagtcgcc...
species | Chlamydomonas reinhardtii |
transcript | EDP03797 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAG GTGCTGGCGGCGATGGCGGAGCTAAEST: gi|16436485|gb|BM001705.1|BM001705
genomic: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAGgtgagagcgc ... cgcgacgcagGTGCTGGCGGCGATGGCGGAGCTAA
EST: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAG GTGCTGGCGGCGATGGCGGAGCTAAACGACCGCCCCATCATCTTCCCGCEST: gi|49466373|gb|BP094286.1|BP094286
genomic: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAGgtgagagcgc ... cgcgacgcagGTGCTGGCGGCGATGGCGGAGCTAAACGACCGCCCCATCATCTTCCCGC
EST: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAG GTGCTGGCGGCGATGGCGGAGCTAAACGACCGCCCCATCATCTTCCCGCTG
genomic: CCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAGgtgagagcgc ... cgcgacgcagGTGCTGGCGGCGATGGCGGAGCTAAACGACCGCCCCATCATCTTCCCGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACGTGCCGCCCTGCGCCACGCTGATCGAGGCGGTGCGCGCCATCAAGCCCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGAGgtgagagcgccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttaggggggttctggtgtgcaagtcgcc
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