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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTACCGGCATGGTGGTGGGCATGACGGCCACCATCTTCAACGCGCCCTTTGACGTCATCAAGTCCCGCTTCCAGAGCCAGGAGCGCGGCCCCAACCAGAAgtgagaagcaaagacagcatgtgctgcggcctcgtagctgtggccttgtgctgcggccttgtggcgtccctgtgtatatccgtgggcagggtgatggccccgctgctgctgtctgtgtcacttgccctgaccgggccccggcccccggccctcactgtcccatcccccag

Basic information

species Chlamydomonas reinhardtii
transcript EDP07984
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|49469413|gb|BP097274.1|BP097274
EST:     GACGTCATCAAGTCCCGCTTCCAGAGCCAGGAGCGCGGCCCCAACCAGAA                         GTACCGCTACACGCTGCCGTCGCTGGTGACGATCATCCGCGAGGAGGGCGT
genomic: GACGTCATCAAGTCCCGCTTCCAGAGCCAGGAGCGCGGCCCCAACCAGAAgtgagaagca ... catcccccagGTACCGCTACACGCTGCCGTCGCTGGTGACGATCATCCGCGAGGAGGGCGT
EST: gi|23363648|gb|BU651468.1|BU651468
EST:     GACGTCATCAAGTCCCGCTTCCAGAGCCAGGAGCGCGGCCCCAACCAGAA                         GTACCGCTACACGCTGCCGTCGCTGGTGACGATCATCCGCGAGGAGGGCGT
genomic: GACGTCATCAAGTCCCGCTTCCAGAGCCAGGAGCGCGGCCCCAACCAGAAgtgagaagca ... catcccccagGTACCGCTACACGCTGCCGTCGCTGGTGACGATCATCCGCGAGGAGGGCGT