1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGCCGCGGCGGCTGAGGCGCCAGCGGCCGCTGAGACAGCTGCTGAGGCACGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggattgcacattgtgacctgatcacaaacagcactgccggggctgttggtttgtcaccgcacagcgacccctgcatgaaggtagtattcccagagcttagcacggctaccgcgctgtcgcgcctgtag
species | Chlamydomonas reinhardtii |
transcript | EDO96606 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGCEST: gi|7615781|gb|AW721221.1|AW721221
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGCEST: gi|15698171|gb|BI722476.1|BI722476
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGCEST: gi|9210411|gb|BE337326.1|BE337326
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGCEST: gi|23367161|gb|BU654980.1|BU654980
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGCEST: gi|23360990|gb|BU648810.1|BU648810
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
EST: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTG GTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
genomic: CGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggat ... gcgcctgtagGTGGACTCGCATGGACAACGGCATTCTGAACCAGCCGCCCGAGTCGGCGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCCGCGGCGGCTGAGGCGCCAGCGGCCGCTGAGACAGCTGCTGAGGCACGCAGTGAGGGCGGTGCTGCGCCGCCCCCGGGAGCCAAGGGTGACGGCTGgtgagtggattgcacattgtgacctgatcacaaacagcactgccggggctgttggtttgtcaccgcacagcgacccctgcatgaaggtagtattcccagagcttagcacggctaccgcgctgtcgcgcctgtag
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