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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACAAGACGGACCTTCCGCCGCAGCGGCACCAGGTGCGGCTGGACATGGCGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtgtgggtcgtcgtgggggtgggggcagagcaggagagggaggggaagtgtagaggctgtgggagttgagtgtgggggctgtagattcgggagtgcgttgatgcggcagttagcacactcgcatgttatcaccccacaacgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP09483
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15368870|gb|BI528296.1|BI528296
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|14242106|gb|BG860922.1|BG860922
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|23361973|gb|BU649809.1|BU649809
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|14235350|gb|BG854166.1|BG854166
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|23361597|gb|BU649417.1|BU649417
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         GACCCGCCCGGCAAGGACGCGGATG
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATG
EST: gi|23361974|gb|BU649810.1|BU649810
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|23363222|gb|BU651042.1|BU651042
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCG                         AACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGATGCGCCGTTCCTGTCCATCGCCACCACC
EST: gi|23361687|gb|BU649507.1|BU649507
EST:     CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTTCGCG                         AACCCGCCCGGCAAGGACGCGGA
genomic: CGCAGGACTGGGCCACCACCAACACCCTCGACTTCTTCGACGTGTCCGCGgtgagtggtg ... cacaacgcagAACCCGCCCGGCAAGGACGCGGA