1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGAGGACGTGGCCAAGCGCTACGAGGCGCTGGGCTGGCACGTGATCCACGTGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtggatgtgaagcttatgcggcggcgatgattgggggaggtcaggtccaaagacaggcgatgagagatgacgggcagggcttggtggagttacg...
species | Chlamydomonas reinhardtii |
transcript | EDP06856 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|49468249|gb|BP096110.1|BP096110
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|6546900|gb|AV392684.1|AV392684
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|49466186|gb|BP094099.1|BP094099
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|49465471|gb|BP093384.1|BP093384
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|7687689|gb|AW758335.1|AW758335
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|10782404|gb|AV639084.1|AV639084
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGGATEST: gi|10783928|gb|AV640600.1|AV640600
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCT-GAT
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|10786495|gb|AV643167.1|AV643167
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|49468951|gb|BP096812.1|BP096812
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATCEST: gi|49467668|gb|BP095529.1|BP095529
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
EST: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAG GCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
genomic: TGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtgg ... acccctgcagGCCAAGGCCGTCAAGGACAAGCCCACTCTGATCAAGGTGTCCACCCTGATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGAGGACGTGGCCAAGCGCTACGAGGCGCTGGGCTGGCACGTGATCCACGTGATCAACGGCAACACCGACGTGGACGGCCTGCGCGCCGCCATTGCTCAGgtgggtgtggatgtgaagcttatgcggcggcgatgattgggggaggtcaggtccaaagacaggcgatgagagatgacgggcagggcttggtggagttacg
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