1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAGCTGCGCGAGTCCATCGAGCTGCCGCTCATGAACCCCGAGCTCTTCCTGCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggagggcgccgggcttggggcgggcgggcactggggcgtcgaggcgtggtgttgggggcagggggcaggaggaatgatgggaatggatggatcagc...
species | Chlamydomonas reinhardtii |
transcript | EDP04786 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GCGCGTGGGCATCAAGCCGCCTAAGGGAGTGCTGCTGTACGGCCCGCCAG GCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCAEST: gi|23364905|gb|BU652725.1|BU652725
genomic: GCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggaggg ... gtgtggtcagGCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCA
EST: GCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAG GCACGGGCAAGACGCTTTCTG-CTCGCGCCAEST: gi|10774917|gb|AV625740.1|AV625740
genomic: GCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggaggg ... gtgtggtcagGCACGGGCAAGACGCTT-CTGGCTCGCGCCA
EST: GTACGGCCCGCCAG GCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCAEST: gi|161793914|gb|FC079827.1|FC079827
genomic: GTACGGCCCGCCAGgtggggaggg ... gtgtggtcagGCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCA
EST: GCGCGTGGGCATCAAGCCGCCTAAGGGAGTGCTGCTGTACGGCCCGCCAG GCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCAEST: gi|161794482|gb|FC080785.1|FC080785
genomic: GCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggaggg ... gtgtggtcagGCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCA
EST: GCGCGTGGGCATCAAGCCGCCTAAGGGAGTGCTGCTGTACGGCCCGCCAG GCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCA
genomic: GCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggaggg ... gtgtggtcagGCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCCAACATCGACGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTGCGCGAGTCCATCGAGCTGCCGCTCATGAACCCCGAGCTCTTCCTGCGCGTGGGCATCAAGCCGCCCAAGGGAGTGCTGCTGTACGGCCCGCCAGgtggggagggcgccgggcttggggcgggcgggcactggggcgtcgaggcgtggtgttgggggcagggggcaggaggaatgatgggaatggatggatcagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtggtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tggatgg