1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGTGTCGTACAAGGAGCTTTACGGCTGGACTATGGACGAGATTGTGTCGCAGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcagtgccgcaatatccaatgcttgccacggtcaactgaggctattggatgcctgcataatgttcttgtccagaactgcccagacactgacattcaactccactgccggtgcccccaacgcaaccctcttggtggccag
species | Chlamydomonas reinhardtii |
transcript | EDO97463 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGATCGGCACCAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAG GCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGCEST: gi|16072208|gb|BI874204.1|BI874204
genomic: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcag ... tggtggccagGCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
EST: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAG GCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGCEST: gi|15699523|gb|BI723828.1|BI723828
genomic: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcag ... tggtggccagGCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
EST: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAG GCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGCEST: gi|14239268|gb|BG858084.1|BG858084
genomic: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcag ... tggtggccagGCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
EST: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAG GCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGCEST: gi|14229546|gb|BG848362.1|BG848362
genomic: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcag ... tggtggccagGCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
EST: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAG GCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
genomic: AGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcag ... tggtggccagGCGTTGGACCGCGGCGCGGTGCTGATGGGTGCCAACAAGATCGCCACCGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGTCGTACAAGGAGCTTTACGGCTGGACTATGGACGAGATTGTGTCGCAGATCGGCACTAAGAACAACTGCACCTTCTGCGGCGTCTTCCGGCGGCAGgtgcgtgcagtgccgcaatatccaatgcttgccacggtcaactgaggctattggatgcctgcataatgttcttgtccagaactgcccagacactgacattcaactccactgccggtgcccccaacgcaaccctcttggtggccag
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