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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCTTCGGCGTGGATCTAGGCGCGCAGGACTCGGGGCCTGGGCCGTGCGACTATGACTGGGGCGACGGCATCCCGCACGTCACCTCCGgtaagggacccggggccgcgcgtttccctttgcccttgcatgaggcccacattggcctgagctcgctgccgggccacgcgcacacagagcgctgtctttgcgctttttccttgtgttatttaacgccgggcgctgctgcaccatgtttaactgtggctgctgcctgctatccccgctccag

Basic information

species Chlamydomonas reinhardtii
transcript EDP05731
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22054760|gb|BQ811510.1|BQ811510
EST:     TGGGCCGTGCGACTATGACTGGGGCGACGGCATCCCGCACGTCACCTCCG                         GCCGCACCCTCACACCCTCGCTCCACGCCAACACCAACTGGGCCAACGACT
genomic: TGGGCCGTGCGACTATGACTGGGGCGACGGCATCCCGCACGTCACCTCCGgtaagggacc ... cccgctccagGCCGCACCCTCACACCCTCGCTCCACGCCAACACCAACTGGGCCAACGACT
EST: gi|15703429|gb|BI727734.1|BI727734
EST:     TGGGCCGTGCGACTATGACTGGGGCGACGGCATCCCGCACGTCACCTCCG                         GCCGCACCCTCACACCCTCGCTCCACGCCAACACCAACTGGGCCAACGACT
genomic: TGGGCCGTGCGACTATGACTGGGGCGACGGCATCCCGCACGTCACCTCCGgtaagggacc ... cccgctccagGCCGCACCCTCACACCCTCGCTCCACGCCAACACCAACTGGGCCAACGACT