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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCCTTACGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgcgggggcggggtcccggcaacagtgcactgccatttggaagtccggtcttacctcgttgtggcgttgcacacag

Basic information

species Chlamydomonas reinhardtii
transcript EDP04678
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22068781|gb|BQ818573.1|BQ818573
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|15701693|gb|BI725998.1|BI725998
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|7593328|gb|AW707579.1|AW707579
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|161814033|gb|FC100044.1|FC100044
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|10793430|gb|AV630796.1|AV630796
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|161797060|gb|FC085665.1|FC085665
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
EST: gi|22064621|gb|BQ815905.1|BQ815905
EST:     CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGG                         ATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA
genomic: CGCGGTGCTGGTGCTGGCGGACCAAACCCACCGTTCTAAGACCATTACGGgtaggtgtgc ... ttgcacacagATGGCGGCAAGGAGCCAACTTGGAATGAGGTGTTCACCTTCCGCAACGTGA