1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCAGCAGGTGTGGTTCGGCTCCATGCCGCACCCGCTGCTGTGGAACTCCCAGGCTGCGGCGCTGGGCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAGgtgggtgggggcggtgttcacgtgcacggtttaacaattaggaggggcctgcctaccaacctgcgactgctcccagaccgtgcgctaccctcgacccagatgcccgccgttcgtgctgttgaccttccgctgcccatgccctgccttccacctcacag
species | Chlamydomonas reinhardtii |
transcript | EDP02255 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGGCTGCGGCGCTGGGCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAG ACCGGCATTGCTGAGCGCCAGAGGGTGCTGGGCGAGACTCTGGCGGGTCTGEST: gi|15700362|gb|BI724667.1|BI724667
genomic: AGGCTGCGGCGCTGGGCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAGgtgggtgggg ... cacctcacagACCGGCATTGCTGAGCGCCAGAGGGTGCTGGGCGAGACTCTGGCGGGTCTG
EST: GCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAG ACCGGCATTGCTGAGCGCCAGAGGGTGCTGGGCGAGACTCTGGCGGGTCTG
genomic: GCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAGgtgggtgggg ... cacctcacagACCGGCATTGCTGAGCGCCAGAGGGTGCTGGGCGAGACTCTGGCGGGTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAGCAGGTGTGGTTCGGCTCCATGCCGCACCCGCTGCTGTGGAACTCCCAGGCTGCGGCGCTGGGCGGCGTGGGCGACATGCTCGAAGTCGCTGCAAAGgtgggtgggggcggtgttcacgtgcacggtttaacaattaggaggggcctgcctaccaacctgcgactgctcccagaccgtgcgctaccctcgacccagatgcccgccgttcgtgctgttgaccttccgctgcccatgccctgccttccacctcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG