1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAAGGCCGGCGCCCAGATCTTTCAGGAGGGCGGTCTGAACTACCTGGGCAACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcgggtggcgggaaacagtgcaccagctgcttggcaataggggttctatcgcagaatcgtggggccatgggagacgtgcacctagcagtgcaaga...
species | Chlamydomonas reinhardtii |
transcript | EDP01724 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7616319|gb|AW721759.1|AW721759
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7427096|gb|AW661269.1|AW661269
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7615707|gb|AW721147.1|AW721147
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7426881|gb|AW661054.1|AW661054
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7616235|gb|AW721675.1|AW721675
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: AGAACATCGTCGCCACCCTGTCCGTACAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7413233|gb|AW651987.1|AW651987
genomic: AGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCEST: gi|7427390|gb|AW661556.1|AW661556
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCC
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCTEST: gi|7616236|gb|AW721676.1|AW721676
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
EST: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAG GTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
genomic: ACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcggg ... gccccctcagGTCGTCCTGCTGGGCCTGGTCGAGGGCTACCGCGTTAACGGCGGCCCCGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGGCCGGCGCCCAGATCTTTCAGGAGGGCGGTCTGAACTACCTGGGCAACCCCTCCCTGATCCACGCCCAGAACATCGTCGCCACCCTGGCCGTGCAGgtacggcgggtggcgggaaacagtgcaccagctgcttggcaataggggttctatcgcagaatcgtggggccatgggagacgtgcacctagcagtgcaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaacagt
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