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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACCGGCGGCCCCTTTGAAGGCGTGAGTAGCTACACCGCCACCTACAAGGGGCCGCAGGGAGAGCGGGCGCTGCCGTTCAAACCAGCACCCACGGAAAAGgtgagcgtgggcgccgtgtgcagcatggggtcgatcaaggaggcagtcagagcaagccgcgcaccggaccgtgcaccgtagatacggctttgcacgagcggatcacgaatgggtggcagggtggacaggtgctattaaaaggcctgatcgtctcagccccgcactccttatttttgccaaccacag

Basic information

species Chlamydomonas reinhardtii
transcript EDO99585
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6543368|gb|AV389152.1|AV389152
EST:     GGCCGCAGGGAGAGCGGGCGCTGCCGTTCAAACCAGCACCCACGGAAAAG                         GAGAACCAGCCGTTCAGCCCGTGGACCACCTACAA
genomic: GGCCGCAGGGAGAGCGGGCGCTGCCGTTCAAACCAGCACCCACGGAAAAGgtgagcgtgg ... ccaaccacagGAGAACCAGCCGTTCAGCCCGTGGACCACCTACAA
EST: gi|8514318|gb|BE122213.1|BE122213
EST:     GGCCGCAGGGAGAGCGGGCGCTGCCGTTCAAACCAGCACCCACGGAAAAG                         GAGAACCAGCCGTTCAGCCCGTGGACCACCTACAA
genomic: GGCCGCAGGGAGAGCGGGCGCTGCCGTTCAAACCAGCACCCACGGAAAAGgtgagcgtgg ... ccaaccacagGAGAACCAGCCGTTCAGCCCGTGGACCACCTACAA