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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCGATCAACTCACAAATTGAGGCCTGGAACGACCCCAACTCCCCCAACGGCTGGGCACGCTTCAGCCAGgtgcgcgtgtgcgctgaaaaaggaaacgaaagcccgtgcgcgcgcgcgcgtgtgtgtgtgtgcgtgtgtgtgtgtcccacccttctgcaacgttgccccttgactttgattgcctggattccctccctgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO97960
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10791066|gb|AV628432.1|AV628432
EST:     AGGCCTGGAACGACCCCAACTCCCCCAACGGCTGGGCACGCTTCAGCCAG                         CTGACGGTGTGGGCGGTGCTGACCCCCGGGGACGGCGTGGACGAGGGAAGC
genomic: AGGCCTGGAACGACCCCAACTCCCCCAACGGCTGGGCACGCTTCAGCCAGgtgcgcgtgt ... ctccctgcagCTGACGGTGTGGGCGGTGCTGACCCCCGGGGACGGCGTGGACGAGGGAAGC