1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGTCGGGCCCCTTCCTGACTGGCTACACCCAGACCATTAACGACTGGTATGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatgtgacggcagttgtgggcgctgggggcgaggggggaggttacgaactggggaggcaagtggcacgtcaaggcttgcggcgtggcggtgggg...
species | Chlamydomonas reinhardtii |
transcript | EDO97346 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|161793257|gb|FC078143.1|FC078143
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGTGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|14237534|gb|BG856350.1|BG856350
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|161798723|gb|FC085817.1|FC085817
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGTGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|15691813|gb|BI716118.1|BI716118
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|7686847|gb|AW757495.1|AW757495
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAGEST: gi|49465752|gb|BP093665.1|BP093665
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCTGCTAG
EST: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGG GCCGCATCTCGGAGCGCGACGTGATC
genomic: TGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatg ... tcacccccagGCCGCATCTCGGAGCGCGACGTGATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTCGGGCCCCTTCCTGACTGGCTACACCCAGACCATTAACGACTGGTATGACCGCGAGATTGACGCAATCAACGAGCCCTACCGCCCCATCCCCTCGGgtaaggaatgtgacggcagttgtgggcgctgggggcgaggggggaggttacgaactggggaggcaagtggcacgtcaaggcttgcggcgtggcggtgggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatgtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gttgtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tacgaac