1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTACGGTGTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcgtggccaagcaagcgcactaccggctgctgtcgaggctgctgttgctgtcaggaggccaacggacgggggatgctttcgtagggacgtttc...
species | Chlamydomonas reinhardtii |
transcript | EDO96603 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|49461894|gb|BP089807.1|BP089807
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|49459603|gb|BP087516.1|BP087516
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|23364904|gb|BU652724.1|BU652724
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|49460762|gb|BP088675.1|BP088675
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|49463250|gb|BP091163.1|BP091163
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGGCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGAEST: gi|49469740|gb|BP097601.1|BP097601
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
EST: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGA GTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
genomic: GTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcg ... atcccggcagGTACCGCAAGGCCTTCAACTGCGTTCAGCGCGGGCACCAGAACTCGCTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACGGTGTGTCCTACCCCGACCTGTACGCCACTGCGGAGAACTGCCCCAACGCCGAgtgagttgcgtggccaagcaagcgcactaccggctgctgtcgaggctgctgttgctgtcaggaggccaacggacgggggatgctttcgtagggacgtttc
- - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcgtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caagcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgctgt