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ACCCCGCCACCTACACGGCTGCTGACAACACCGTCCTAACCGTCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtcccactgcagcgccagggtgggcgaggccagggcgaggccagggttggatacgccaggagctggctgggagcgtggcatgggtgaacgcggtct...
species | Chlamydomonas reinhardtii |
transcript | EDO99595 |
intron # | 29 |
splice site | 5' |
intron type | U2 |
EST: CTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGACEST: gi|23360739|gb|BU648559.1|BU648559
genomic: CTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
EST: GTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGACEST: gi|8933243|gb|BE228004.1|BE228004
genomic: GTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
EST: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGACEST: gi|10771679|gb|AV622502.1|AV622502
genomic: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
EST: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGACEST: gi|10774270|gb|AV625093.1|AV625093
genomic: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
EST: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGACEST: gi|6546895|gb|AV392679.1|AV392679
genomic: TCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
EST: CTGGCGTGTATCTGCAGTCCGGCAACATTGTCATG GTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
genomic: CTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtccca ... cgtgacgcagGTGAGCACCACCACCATCACTGCGGGCAAGTCCATCATCCACATCATCGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCCGCCACCTACACGGCTGCTGACAACACCGTCCTAACCGTCATTGCCAACTCAACTGGCGTGTATCTGCAGTCCGGCAACATTGTCATGgtgagtcccactgcagcgccagggtgggcgaggccagggcgaggccagggttggatacgccaggagctggctgggagcgtggcatgggtgaacgcggtct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cagcgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggttgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tggctgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgggt