1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTGGGCCGCGACCTCATCGGCCTGGCGGAGACCGGCAGTGGCAAGACGCTGGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtgagcgaacagggcgcgaggggatgggcacggtgccaggcggccggggagtcgaaaggctgcgggtcagcaggcgcatggcgccacggccag...
species | Chlamydomonas reinhardtii |
transcript | EDP09760 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTAC AGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGGEST: gi|6546514|gb|AV392298.1|AV392298
genomic: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtg ... tggcccacagAGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
EST: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTATCTGC AGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGGEST: gi|161790886|gb|FC080239.1|FC080239
genomic: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtg ... tggcccacagAGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
EST: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTGC AGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGGEST: gi|8933238|gb|BE227999.1|BE227999
genomic: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtg ... tggcccacagAGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
EST: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTAC AGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGGEST: gi|161803944|gb|FC093859.1|FC093859
genomic: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtg ... tggcccacagAGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
EST: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTGC AGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
genomic: GGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtg ... tggcccacagAGTCCGGCGATGGCCCCATCGTGCTGGTGCTGGCGCCCACGCGCGAGCTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGGCCGCGACCTCATCGGCCTGGCGGAGACCGGCAGTGGCAAGACGCTGGCGTACCTGCTGCCGGCCGTGGTGCACATCAACGCGCAGCCCTACCTACgtgagtagtgagcgaacagggcgcgaggggatgggcacggtgccaggcggccggggagtcgaaaggctgcgggtcagcaggcgcatggcgccacggccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcgggt