1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GATGATGTCGGATTGGAAGGTGGAGCTGGTGGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctaggtggcgcttgtgcccttgcccccggattacggccgtcgctcgcagcatcgtcttcgacttcataacgcgtgctgggcgccgtttgggtcggcgcggctcgactaacgcgcgtccgttgctgtcgatgcag
species | Chlamydomonas reinhardtii |
transcript | EDP09753 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|22071044|gb|BQ820382.1|BQ820382
genomic: GACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|10788266|gb|AV644938.1|AV644938
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|8400882|gb|BE056516.1|BE056516
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|49466669|gb|BP094582.1|BP094582
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|16071742|gb|BI873738.1|BI873738
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCTEST: gi|15699843|gb|BI724148.1|BI724148
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
EST: GGAAGACAANNTCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACA GCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
genomic: GGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctag ... gtcgatgcagGCCCTTATGAGGGGGGACTCTGGAGGATACACGTCGAGCTGCCGGAAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGATGTCGGATTGGAAGGTGGAGCTGGTGGAAGACAACATCAGCGAGTTCAACGTCGACTTCGCCGGCCCCAAAGACAgtaggtctaggtggcgcttgtgcccttgcccccggattacggccgtcgctcgcagcatcgtcttcgacttcataacgcgtgctgggcgccgtttgggtcggcgcggctcgactaacgcgcgtccgttgctgtcgatgcag
- - - - - - - - - - - - - - - GGAAGA