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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTACATCGATCGCTTTGATGCAAgtaagtatacccaggcactggctcatattggtggcagttgctgacagcccccggttgtgcccccgttgttctcccgaccttggccctcttgcgccgtgcgccttggcggttggccgtgctttgtatctgtacacgtgccaggcatgcattgtcgtgtccttaaccttcggatgcacgaacaacgtgcctgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP09404
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16435426|gb|BM000646.1|BM000646
EST:     GAGTACATCGATCGCTTTGATGCAA                         CCTTCAAGGTGTGGGCGGACGCCGGCATTGCCGTGTATGGCTTCGATGTTC
genomic: GAGTACATCGATCGCTTTGATGCAAgtaagtatac ... gtgcctgcagCCTTCAAGGTGTGGGCGGACGCCGGCATTGCCGTGTATGGCTTCGATGTTC
EST: gi|23366054|gb|BU653874.1|BU653874
EST:     GAGTACATCGATCGCTTTGATGCAA                         CCTTCAAGGTGTGGGCGGACGCCGGCATTGCCGTGTATGGCTTCGATGTTC
genomic: GAGTACATCGATCGCTTTGATGCAAgtaagtatac ... gtgcctgcagCCTTCAAGGTGTGGGCGGACGCCGGCATTGCCGTGTATGGCTTCGATGTTC