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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGGACCAGATCAAGCAGTTCCGCCAGTGGAACTCCCTGACCCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcaccatcaagcgttttgctcggggtccggcgtaggcgttgcgatctggacaacgccagcatctttttcagcacagaaagcacattttgatgcccg...

Basic information

species Chlamydomonas reinhardtii
transcript EDP06856
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EDP06856 (Chlamydomonas reinhardtii), 5'ss of exon 2
lower sequence: EFJ07676 (Selaginella moellendorffii), 5'ss of exon 2
CTGGACCAGATCAAGCAGTTCCGCCAGTGGAACTCCCTGACCCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca--tcaagcgttttgctcggggtccggcgtaggcgttgcgatctggacaacgccagcatctttttcagcacagaaagcacattttgatgcccg
   ||  |  | ||||| ||||| || |||  |  |   || || ||||| || |||||||||| ||||||||||||||| || || |||||| |        |||  ||| |||   ||     |     ||| ||||  |    |||                                            
GAAGAGGATTTGAAGCAATTCCGTCAATGGGGCAGCAGAACTCCTGGCCATCCAGAGAACTTCGAGACTCCCGGCGTGGAAGTCACGACTGgtaattgttgactcactcgtgttgaatggttgttgattgtggc-ttgcttttcaaacag-------------------------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10783328|gb|AV640000.1|AV640000
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTC
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTC
EST: gi|10783906|gb|AV640578.1|AV640578
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|22076982|gb|BQ825758.1|BQ825758
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10783892|gb|AV640564.1|AV640564
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTAT
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTAT
EST: gi|10784879|gb|AV641551.1|AV641551
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCA
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCA
EST: gi|10791689|gb|AV629055.1|AV629055
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|49466422|gb|BP094335.1|BP094335
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10788145|gb|AV644817.1|AV644817
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|49470897|gb|BP098758.1|BP098758
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10786128|gb|AV642800.1|AV642800
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10787628|gb|AV644300.1|AV644300
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|49466563|gb|BP094476.1|BP094476
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|8400946|gb|BE056580.1|BE056580
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10784780|gb|AV641452.1|AV641452
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTG
EST: gi|49467192|gb|BP095105.1|BP095105
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCG
EST: gi|239840773|gb|GR282463.1|GR282463
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10789540|gb|AV645269.1|AV645269
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGCGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10786118|gb|AV642790.1|AV642790
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGAC-ACTG                         GTCCC-TGGGCCAGG-TATCTGCAACGCC
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCC
EST: gi|49466622|gb|BP094535.1|BP094535
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10789066|gb|AV626786.1|AV626786
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|6548055|gb|AV393839.1|AV393839
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10783274|gb|AV639946.1|AV639946
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCG
EST: gi|6548544|gb|AV394328.1|AV394328
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10793007|gb|AV630373.1|AV630373
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10784339|gb|AV641011.1|AV641011
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCC
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCC
EST: gi|10793865|gb|AV631231.1|AV631231
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10784853|gb|AV641525.1|AV641525
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|7413353|gb|AW652107.1|AW652107
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGTGCCAGGGTATCTGCAACG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACG
EST: gi|49469892|gb|BP097753.1|BP097753
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAG
EST: gi|6548437|gb|AV394221.1|AV394221
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|49465875|gb|BP093788.1|BP093788
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10786846|gb|AV643518.1|AV643518
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10787836|gb|AV644508.1|AV644508
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10788018|gb|AV644690.1|AV644690
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10784910|gb|AV641582.1|AV641582
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCA
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCA
EST: gi|34981503|gb|CF555420.1|CF555420
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGACTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10786033|gb|AV642705.1|AV642705
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10787819|gb|AV644491.1|AV644491
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|10787343|gb|AV644015.1|AV644015
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|49462565|gb|BP090478.1|BP090478
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
EST: gi|22076428|gb|BQ825204.1|BQ825204
EST:     CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTG                         GTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG
genomic: CCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcacca ... tgctccgtagGTCCCCTGGGCCAGGGTATCTGCAACGCCGTCGGCCTGGCCGTGGCTGAGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTGGACCAGATCAAGCAGTTCCGCCAGTGGAACTCCCTGACCCCCGGCCACCCGGAGAACTTCGTGACTCCCGGCGTGGAGGTGACCACTGgtgagcaccatcaagcgttttgctcggggtccggcgtaggcgttgcgatctggacaacgccagcatctttttcagcacagaaagcacattttgatgcccg

- - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - accatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agcgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - taggcgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacgcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagcaca