1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCGAGGACGACTGGGTGGCTGTCATGGCCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACGgtggggcctggggggccggctggcacctggcaggggctccggcggtggcttggcgggcggttgcgggacagcacgacctcttcttggccactcacgtcgt...
species | Chlamydomonas reinhardtii |
transcript | EDP03924 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACG GGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCGEST: gi|10777622|gb|AV634302.1|AV634302
genomic: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACGgtggggcctg ... ccaacgtcagGGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCG
EST: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACG GGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCGEST: gi|23364723|gb|BU652543.1|BU652543
genomic: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACGgtggggcctg ... ccaacgtcagGGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCG
EST: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACG GGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCG
genomic: CCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACGgtggggcctg ... ccaacgtcagGGCTTCTACCAGGCCGGGCCCCCGGGCGATGACACGCTGGTGATCGGGCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGAGGACGACTGGGTGGCTGTCATGGCCACAGTGGCGTGTCTGCTGCATGAGGCGTTCGAGTACTACCACTGGACGgtggggcctggggggccggctggcacctggcaggggctccggcggtggcttggcgggcggttgcgggacagcacgacctcttcttggccactcacgtcgt
- - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtggctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gacagca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cactcac