Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATCGCCGTGAAGACCAAGTATGCGGTCTACGTGCCGCACACTGCTGGTCGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatcaatcccggtgctagtcacgcaggcattggccgaagccagctgagctcggcggccgccgtgcgccggcgcgggcgggcagtcgtcggcggac...

Basic information

species Chlamydomonas reinhardtii
transcript EDP01658
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15372060|gb|BI531486.1|BI531486
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|7687072|gb|AW757720.1|AW757720
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34990620|gb|CF564537.1|CF564537
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34992204|gb|CF566121.1|CF566121
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49467185|gb|BP095098.1|BP095098
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49470065|gb|BP097926.1|BP097926
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34990619|gb|CF564536.1|CF564536
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGTCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|6544623|gb|AV390407.1|AV390407
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34984023|gb|CF557940.1|CF557940
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|7545796|gb|AW676284.1|AW676284
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22071482|gb|BQ820820.1|BQ820820
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22071798|gb|BQ821136.1|BQ821136
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGCGCAACTCCCTGATGATGCACGGTCGCAACAACGTCAAG
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAG
EST: gi|22073876|gb|BQ823206.1|BQ823206
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22070734|gb|BQ820072.1|BQ820072
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34991893|gb|CF565810.1|CF565810
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469400|gb|BP097261.1|BP097261
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|7545578|gb|AW676066.1|AW676066
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49467337|gb|BP095250.1|BP095250
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATGGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22076848|gb|BQ825624.1|BQ825624
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|15367729|gb|BI527155.1|BI527155
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22071874|gb|BQ821212.1|BQ821212
EST:     GCTTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: GC-TACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469717|gb|BP097578.1|BP097578
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|10793896|gb|AV631262.1|AV631262
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|161796628|gb|FC083140.1|FC083140
EST:     GGTTACCAGAAGGGCGGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49467797|gb|BP095658.1|BP095658
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34985639|gb|CF559556.1|CF559556
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49466898|gb|BP094811.1|BP094811
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469762|gb|BP097623.1|BP097623
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|15701424|gb|BI725729.1|BI725729
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|6552163|gb|AV397947.1|AV397947
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|14237243|gb|BG856059.1|BG856059
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469778|gb|BP097639.1|BP097639
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATGGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|10793823|gb|AV631189.1|AV631189
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22050075|gb|BQ809058.1|BQ809058
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|10778592|gb|AV635272.1|AV635272
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|6552159|gb|AV397943.1|AV397943
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22076703|gb|BQ825479.1|BQ825479
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469184|gb|BP097045.1|BP097045
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|7616326|gb|AW721766.1|AW721766
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGGCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22072448|gb|BQ821786.1|BQ821786
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49461824|gb|BP089737.1|BP089737
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATGGTCGAGCG                         CCTGTGCAACTCCCTGCATGATGCACGGCCGCAACAACGGCAAGAAGCTGA
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTG-ATGATGCACGGCCGCAACAACGGCAAGAAGCTGA
EST: gi|22074285|gb|BQ823380.1|BQ823380
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49469841|gb|BP097702.1|BP097702
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34994187|gb|CF568104.1|CF568104
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|49467223|gb|BP095136.1|BP095136
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|15367825|gb|BI527251.1|BI527251
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34994188|gb|CF568105.1|CF568105
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|14242403|gb|BG861219.1|BG861219
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|22074623|gb|BQ823546.1|BQ823546
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|7593508|gb|AW707759.1|AW707759
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
EST: gi|34988453|gb|CF562370.1|CF562370
EST:     CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCG                         CCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT
genomic: CGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatca ... ctttctgcagCCTGTGCAACTCCCTGATGATGCACGGCCGCAACAACGGCAAGAAGCTGAT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACATCGCCGTGAAGACCAAGTATGCGGTCTACGTGCCGCACACTGCTGGTCGCTACCAGAAGCGCCGCTTCCGCAAGGCGCTGTGCCCCATTGTTGAGCGgtaggtatcaatcccggtgctagtcacgcaggcattggccgaagccagctgagctcggcggccgccgtgcgccggcgcgggcgggcagtcgtcggcggac

- - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgctagt