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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGACGCCTCGCTCATTGTACGCCGCATGGTGCCGGGCAGCTTCGACGCCGAGTACCCGCGCGTGGCGGACGCCGACCAGTGCCACATCGTGGGCGTGCAGgtgagcttgcgggccgtgggcggcgcctaccttcgcgaggcagggcgggactcgggcatgagcttggcctggggtcccaacgggatatgggtgggaaagaaccggcgccggcgtgccgctgcgtgtggggctgcaccagcgctcggaaagaagccttgccatatcctgtcctggtgttgtggtggcgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP07993
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15701622|gb|BI725927.1|BI725927
EST:     AGTACCCGCGCGTGGCGGACGCCGACCAGTGCCACATCGTGGGCGTGCAG                         GTGCCGGAGGGTCGCGGCCCGCTGCCCGCCAGCGTCATCGCCATGCTGCGC
genomic: AGTACCCGCGCGTGGCGGACGCCGACCAGTGCCACATCGTGGGCGTGCAGgtgagcttgc ... ggtggcgcagGTGCCGGAGGGTCGCGGCCCGCTGCCCGCCAGCGTCATCGCCATGCTGCGC
EST: gi|14235493|gb|BG854309.1|BG854309
EST:     AGTACCCGCGCGTGGCGGACGCCGACCAGTGCCACATCGTGGGCGTGCAG                         GTGCCGGAGGGTCGCGGCCCGCTGCCCGCCAGCGTCATCGCCATGCTGCGC
genomic: AGTACCCGCGCGTGGCGGACGCCGACCAGTGCCACATCGTGGGCGTGCAGgtgagcttgc ... ggtggcgcagGTGCCGGAGGGTCGCGGCCCGCTGCCCGCCAGCGTCATCGCCATGCTGCGC