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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGCCCGAGTTGAGGCGAGCGCAGACGTGTACAGCTTTGgtgagcatcaattcggccttactggtttgatcgcaatggcacgccggactgcttgtcgcagctcccctgtccagtcggatcttcatgccatgcctcaaagacataaccccggtgcttgcaattccttatgagttatgacttgtgctcctaccataactcaaccgggtgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP09323
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15693911|gb|BI718216.1|BI718216
EST:     AGGCCCGAGTTGAGGCGAGCGCAGACGTGTACAGCTTTG                         GCATCTTGTGCTGGGAGCTGGTGGCAGGCGGCATCCGACCCTTCCCGCACC
genomic: AGGCCCGAGTTGAGGCGAGCGCAGACGTGTACAGCTTTGgtgagcatca ... ccgggtgcagGCATCTTGTGCTGGGAGCTGGTGGCAGGCGGCATCCGACCCTTCCCGCACC
EST: gi|15703422|gb|BI727727.1|BI727727
EST:     AGGCCCGAGTTGAGGCGAGCGCAGACGTGTACAGCTTTG                         GCATCTTGTGCTGGGAGCTGGTGGCAGGCGGCATCCGACCCTTCCCGCACC
genomic: AGGCCCGAGTTGAGGCGAGCGCAGACGTGTACAGCTTTGgtgagcatca ... ccgggtgcagGCATCTTGTGCTGGGAGCTGGTGGCAGGCGGCATCCGACCCTTCCCGCACC