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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCACTGCACTAGTCCATAAGCCGTTACGCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagctcaatttgttatcgggcagactgcagcggggcttgtgaggatttggatgctctcagctcatcatatgctccttctggtgtggttatttgagctggcgatcgcctcctttgcgtattggtgccctgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP09990
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6543210|gb|AV388994.1|AV388994
EST:     TGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: TGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10126372|gb|BE725076.1|BE725076
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|23366793|gb|BU654612.1|BU654612
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10126346|gb|BE725050.1|BE725050
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10126839|gb|BE725543.1|BE725543
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10772139|gb|AV622962.1|AV622962
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10773576|gb|AV624399.1|AV624399
EST:     ATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: ATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10773103|gb|AV623926.1|AV623926
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10778586|gb|AV635266.1|AV635266
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6545048|gb|AV390832.1|AV390832
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|8576555|gb|BE129192.1|BE129192
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10792695|gb|AV630061.1|AV630061
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|8576553|gb|BE129190.1|BE129190
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|23362483|gb|BU650303.1|BU650303
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|16071854|gb|BI873850.1|BI873850
EST:     AAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: AAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|16072736|gb|BI874732.1|BI874732
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|7687021|gb|AW757669.1|AW757669
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6545585|gb|AV391369.1|AV391369
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6541061|gb|AV386845.1|AV386845
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6544893|gb|AV390677.1|AV390677
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10781839|gb|AV638519.1|AV638519
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10773400|gb|AV624223.1|AV624223
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10127966|gb|BE726782.1|BE726782
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|22063070|gb|BQ815066.1|BQ815066
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|16073420|gb|BI875416.1|BI875416
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10794397|gb|AV631763.1|AV631763
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|22074223|gb|BQ823355.1|BQ823355
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|8513704|gb|BE121599.1|BE121599
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6542806|gb|AV388590.1|AV388590
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10775223|gb|AV631903.1|AV631903
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|49466099|gb|BP094012.1|BP094012
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10780260|gb|AV636940.1|AV636940
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|22071077|gb|BQ820415.1|BQ820415
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTACCGGCTCGCCGCAGCTCCGTCGAGGTGCGCGCCAGCACTGA
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGA
EST: gi|23362899|gb|BU650719.1|BU650719
EST:     GCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|6550432|gb|AV396216.1|AV396216
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10779575|gb|AV636255.1|AV636255
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|49459417|gb|BP087330.1|BP087330
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|7593283|gb|AW707422.1|AW707422
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10783173|gb|AV639845.1|AV639845
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10773533|gb|AV624356.1|AV624356
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|10769963|gb|AV620788.1|AV620788
EST:     GCACA-TTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGTAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|7427367|gb|AW661533.1|AW661533
EST:     GCACATTTTGCAAAA-GGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
EST: gi|22062727|gb|BQ814908.1|BQ814908
EST:     GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCG                         GCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG
genomic: GCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagct ... tgccctgcagGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTGAGCAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CAGCACTGCACTAGTCCATAAGCCGTTACGCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTGTTGCCACTCGCGCGgtgaggagctcaatttgttatcgggcagactgcagcggggcttgtgaggatttggatgctctcagctcatcatatgctccttctggtgtggttatttgagctggcgatcgcctcctttgcgtattggtgccctgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT