1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCCCCAACCCACTTCACTTGCACCCGATCGCTTTGCGGCGGTGCTTCCTCGTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccacagggtcatatttgtgcagcgcctgatcggggcaagaatattgtgcgcgtgggagaatcggctgcagcatcgcctgacaaaccgtttgacgcgcgggctaatttcgcttcctttgctagcag
species | Chlamydomonas reinhardtii |
transcript | EDP02064 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14238456|gb|BG857272.1|BG857272
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGCAGEST: gi|14231499|gb|BG850315.1|BG850315
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT--A-CAGgtgcgccaca ... ttgctagc
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10776946|gb|AV633626.1|AV633626
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10772597|gb|AV623420.1|AV623420
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14233776|gb|BG852592.1|BG852592
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161821967|gb|FC107623.1|FC107623
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49458864|gb|BP086777.1|BP086777
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161815965|gb|FC099916.1|FC099916
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10776800|gb|AV633480.1|AV633480
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161809458|gb|FC096515.1|FC096515
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161794542|gb|FC080819.1|FC080819
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49458879|gb|BP086792.1|BP086792
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49464864|gb|BP092777.1|BP092777
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGCAGEST: gi|34990467|gb|CF564384.1|CF564384
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT--A-CAGgtgcgccaca ... ttgctagc
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161822375|gb|FC111125.1|FC111125
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10776376|gb|AV633056.1|AV633056
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|8933173|gb|BE227934.1|BE227934
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14231498|gb|BG850314.1|BG850314
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCNACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10780438|gb|AV637118.1|AV637118
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|16072471|gb|BI874467.1|BI874467
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCEST: gi|161818141|gb|FC102289.1|FC102289
genomic: GTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT---ACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|7545660|gb|AW676148.1|AW676148
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10780441|gb|AV637121.1|AV637121
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10777324|gb|AV634004.1|AV634004
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14238480|gb|BG857296.1|BG857296
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161797736|gb|FC085184.1|FC085184
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161809582|gb|FC097393.1|FC097393
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10126294|gb|BE724998.1|BE724998
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49460279|gb|BP088192.1|BP088192
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10776931|gb|AV633611.1|AV633611
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161793042|gb|FC081360.1|FC081360
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161800748|gb|FC084709.1|FC084709
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161817310|gb|FC104916.1|FC104916
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14229106|gb|BG847922.1|BG847922
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10780662|gb|AV637342.1|AV637342
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10782227|gb|AV638907.1|AV638907
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|15371771|gb|BI531197.1|BI531197
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10781224|gb|AV637904.1|AV637904
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10781486|gb|AV638166.1|AV638166
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161819523|gb|FC108312.1|FC108312
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10775146|gb|AV625969.1|AV625969
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14231500|gb|BG850316.1|BG850316
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10774352|gb|AV625175.1|AV625175
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14240092|gb|BG858908.1|BG858908
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGNCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCEST: gi|161811254|gb|FC095353.1|FC095353
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCG-CCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49459736|gb|BP087649.1|BP087649
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGACTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|34990466|gb|CF564383.1|CF564383
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161823017|gb|FC106587.1|FC106587
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10782615|gb|AV639287.1|AV639287
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|22071487|gb|BQ820825.1|BQ820825
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161802096|gb|FC089658.1|FC089658
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|15369487|gb|BI528913.1|BI528913
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10780986|gb|AV637666.1|AV637666
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14242577|gb|BG861393.1|BG861393
genomic: GCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161817261|gb|FC104906.1|FC104906
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161798476|gb|FC085427.1|FC085427
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161793555|gb|FC078467.1|FC078467
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10782077|gb|AV638757.1|AV638757
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49459606|gb|BP087519.1|BP087519
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49459731|gb|BP087644.1|BP087644
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161823426|gb|FC105748.1|FC105748
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|16071678|gb|BI873674.1|BI873674
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161820862|gb|FC108949.1|FC108949
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10779395|gb|AV636075.1|AV636075
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|15368172|gb|BI527598.1|BI527598
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|49459755|gb|BP087668.1|BP087668
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|7545580|gb|AW676068.1|AW676068
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|161803656|gb|FC090568.1|FC090568
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|10770819|gb|AV621644.1|AV621644
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCEST: gi|14229353|gb|BG848169.1|BG848169
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGGCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGAC-GCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCCCAACCCACTTCACTTGCACCCGATCGCTTTGCGGCGGTGCTTCCTCGTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccacagggtcatatttgtgcagcgcctgatcggggcaagaatattgtgcgcgtgggagaatcggctgcagcatcgcctgacaaaccgtttgacgcgcgggctaatttcgcttcctttgctagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG