1 5' 3' |
TATGACCATGGGTTCTTCCGCAACCATAGCGGATGTGCTCGGAGGAGTCCTCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCGgtaggtctgttgacaaactatgctgcgtgcgacacgtggatgacacggcttgggggctcagtggggctcagtgggtgacggctcagtcgtgggctcagcc...
species | Chlamydomonas reinhardtii |
transcript | EDP01703 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCG ATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTCEST: gi|15702688|gb|BI726993.1|BI726993
genomic: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCGgtaggtctgt ... gcccccgcagATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTC
EST: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCG ATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTCEST: gi|10793986|gb|AV631352.1|AV631352
genomic: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCGgtaggtctgt ... gcccccgcagATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTC
EST: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCG ATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTC
genomic: TCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCGgtaggtctgt ... gcccccgcagATGATTTTTGACGCCCCTGGCTCCTCAAAAAACACACTGACGCGCCTGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGACCATGGGTTCTTCCGCAACCATAGCGGATGTGCTCGGAGGAGTCCTCGCGCTGGCGTACACGGTCATAAGTGTACCCTGCGTCGTGTTCTCGCCGgtaggtctgttgacaaactatgctgcgtgcgacacgtggatgacacggcttgggggctcagtggggctcagtgggtgacggctcagtcgtgggctcagcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tctgttg
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggatga
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