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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCCGTGTTCCCCGCACCATCAACTACGACTGGGTTTCGTCTCGCTGGGACAACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGACgtgagcataagcggggtggctggccagtcccccccccctgtaccaatccttgcaacccccggcccttcggctcctgaacccttgccgcgtcgggcttttcgtttgccggcgtgtgacctgtcaaggaatgttcgcacgtgtgtggcctgacgcgacatcccgccaccgtgcgtgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO99598
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15693805|gb|BI718110.1|BI718110
EST:     ACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGAC                         ATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT
genomic: ACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGACgtgagcataa ... gtgcgtgcagATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT
EST: gi|15703469|gb|BI727774.1|BI727774
EST:     ACAACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGAC                         ATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT
genomic: ACAACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGACgtgagcataa ... gtgcgtgcagATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT
EST: gi|15697832|gb|BI722137.1|BI722137
EST:     ACAACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGAC                         ATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT
genomic: ACAACTCCACCACGCCCGCCACCTTTACAAGCCTGAGCCGGCAGCACGACgtgagcataa ... gtgcgtgcagATCTGCTCCTACAACAAGCTCAACTTCGTGCGGGTGATTAACAAGGTGTAT