Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|14229441|gb|BG848257.1|BG848257EST: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAG GTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
genomic: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAGgtgacgccac ... gccgccgcagGTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
EST:
gi|7427422|gb|AW661588.1|AW661588EST: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAG GTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
genomic: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAGgtgacgccac ... gccgccgcagGTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
EST:
gi|8933125|gb|BE227886.1|BE227886EST: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAG GTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
genomic: CAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAGgtgacgccac ... gccgccgcagGTAGCTTCACGGAGACGGAGCTGGGCGAGGTGAAGTTCCCGGAGATCTCCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAAACGGTGAAGCTGGTCTCCGCGGAGGGCTATGAGTTCATTGTGGACTACAAGGCCGCGTGCGTGTCCAACACCATCCGCAACATGCTCAGCTCCCAAGgtgacgccacgctcaccctcagtttacggggcgcagtcacgtaggcttcatagtatttggggcgtcggagaggtccagtgtgacctgaagaatggcctgggctgcggtatcaacacgcgggcgttgttggagctgcaatgtgaacgcggatgtccctcacaggtccctcacgggatccctccttggctcggccgccgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC