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GTAGAAAGCTCTTCCTTGATGCAATGCAGGTTGTGCGGTGGAAAACAGCATCAACCTCGACGATTGAACCTTATATTCGTTATGCAGCCTCATTCGCTGGgtaatggactaaaccttttttgttgagatgttctgtaacaaggaaaggcagattttgttaagtcatgaagctctgtttttcatccttcacttacaagtcc...
species | Arabidopsis thaliana |
transcript | AT5G51290.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTATGCAGCCTCATTCGCTGG ATACGGGTTTTATGGTGATGTCATTTCAGAAAGTGAAAA-TATCGGTGGATEST: gi|164142908|gb|EL968655.1|EL968655
genomic: TTATGCAGCCTCATTCGCTGGgtaatggact ... attagttcagATACGGGTTTTATGGTGATGTCATTTCAGAAAGTGAAAAATATCGGTGGAT
EST: TTATGCAGCCTCATTCGCTGG ATACGGGTTTTATAGGTGATGTCATTTCAGAAAGTG-AAAATATCGGTGGA
genomic: TTATGCAGCCTCATTCGCTGGgtaatggact ... attagttcagATACGGGTTTTAT-GGTGATGTCATTTCAGAAAGTGAAAAATATCGGTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGAAAGCTCTTCCTTGATGCAATGCAGGTTGTGCGGTGGAAAACAGCATCAACCTCGACGATTGAACCTTATATTCGTTATGCAGCCTCATTCGCTGGgtaatggactaaaccttttttgttgagatgttctgtaacaaggaaaggcagattttgttaagtcatgaagctctgtttttcatccttcacttacaagtcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaggaaag
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