1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ATCAATGTTACCACACAAAGAGGTTTTATACCAGTTGATGAGCGAATGCGTGTTATTGATGGAAATGGAAAGCTGgttagtggagttttctttcatatagcttatttcttaccaaaagttatatatttttaagctactgagtcactcttggttgatag
species | Arabidopsis thaliana |
transcript | AT4G16155.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TATACCAGTTGATGAGCGAATGTCGTGTTATTGATGGAAATGGAAAGCTG GTTCCCCACTTGTACTGCATCGGTGATGCCAATGGTAAACTGAEST: gi|125001682|gb|EL073951.1|EL073951
genomic: TATACCAGTTGATGAGCGAATG-CGTGTTATTGATGGAAATGGAAAGCTGgttagtggag ... tggttgatagGTTCCCCACTTGTACTGCATCGGTGATGCCAATGGTAAACTGA
EST: CAGTTGATGAGCGAATGCGTGTTATTGATGGAAATGGAAAGCTG GTTCCCCACTTGTACTGCATCGGTGATGCCAATGGTAAACTGATG
genomic: CAGTTGATGAGCGAATGCGTGTTATTGATGGAAATGGAAAGCTGgttagtggag ... tggttgatagGTTCCCCACTTGTACTGCATCGGTGATGCCAATGGTAAACTGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAATGTTACCACACAAAGAGGTTTTATACCAGTTGATGAGCGAATGCGTGTTATTGATGGAAATGGAAAGCTGgttagtggagttttctttcatatagcttatttcttaccaaaagttatatatttttaagctactgagtcactcttggttgatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG