1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AGAATGGAAAAATGTCTGCTAGTGATCCAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAGgtaaattctgtaattctttttgttctttccatctattataacaagccattctgggtttccacatcaaccttgtaggctttcacacacattcatcgtctag...
species | Arabidopsis thaliana |
transcript | AT3G04600.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAG ATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCCEST: gi|124772879|gb|EH863008.1|EH863008
genomic: CAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAGgtaaattctg ... tcatatgcagATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCC
EST: CAAAGGACNTTAAAAACAAG ATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCCATTGAGAAGCACCGAEST: gi|86084599|gb|DR380358.1|DR380358
genomic: CAAAGGACATTAAAAACAAGgtaaattctg ... tcatatgcagATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCCATTGAGAAGCACCGA
EST: CAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAG ATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCCATTGAGAAGCACCGA
genomic: CAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAGgtaaattctg ... tcatatgcagATAAACAGATATGCGTTTAGTGGTGGGCAAGACTCCATTGAGAAGCACCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAATGGAAAAATGTCTGCTAGTGATCCAAATTCTGCTATCTATGTGACTGATTCCGCAAAGGACATTAAAAACAAGgtaaattctgtaattctttttgttctttccatctattataacaagccattctgggtttccacatcaaccttgtaggctttcacacacattcatcgtctag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG