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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCTGTGACAGCCACGAGTGCTAGAAGCTCTCTCGGATTGAGCATTCAATACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacaccaaatctcttctgttttccgctttcttcagttgtataataaattttgttttgccag

Basic information

species Arabidopsis thaliana
transcript AT2G33640.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|116400822|gb|EG443414.1|EG443414
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116401156|gb|EG443748.1|EG443748
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GTCGATGTTATCCAGCATTTGGAGCCTGGACCTGCACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116400823|gb|EG443415.1|EG443415
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116401159|gb|EG443751.1|EG443751
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116401154|gb|EG443746.1|EG443746
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116401161|gb|EG443753.1|EG443753
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
EST: gi|116400802|gb|EG443394.1|EG443394
EST:     ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAG                         GACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT
genomic: ACCGTGGTGCCTCCTTGTGTACACCCCCAAACATATTCGTGGACCAACAGgtaaaaacac ... gttttgccagGACGATGTTATCCAGCATTTGGAGCCTGGACCTGTACGATCCACAATAGAT