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CTTTTCTGCCGCAGGTCTTCCCCACAATGAAATTGCTGCTCAGATTTGCCGTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgatttatacattactggtccgtgtctacagttggaaattggtttgttacaattataacagtgatcccttagacagttagacatacccattaca...
species | Arabidopsis thaliana |
transcript | AT4G38510.4 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAG CATCAGGAGGATGATAACTTCGEST: gi|86066802|gb|DR362559.1|DR362559
genomic: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgat ... gaatttgcagCATCAGGAGGATGATAACTTCG
EST: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAG CATCAGGAGGATGATAACTTCGCCATTGTGTTCGCAGCAATGGGTGTGAACEST: gi|116450411|gb|EG493003.1|EG493003
genomic: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgat ... gaatttgcagCATCAGGAGGATGATAACTTCGCCATTGTGTTCGCAGCAATGGGTGTGAAC
EST: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAG CATCAGGAGGATGATAACTTCGCCATTGTGTTCGAAGCAATGGGTGTGAACEST: gi|124811291|gb|EH896157.1|EH896157
genomic: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgat ... gaatttgcagCATCAGGAGGATGATAACTTCGCCATTGTGTTCGCAGCAATGGGTGTGAAC
EST: TAATCTTCTCGAG CATCAGGAGGATGATAACTTCGCCATTGTGTTCGCAGCAATGGGTGTGAACEST: gi|86066801|gb|DR362558.1|DR362558
genomic: TAATCTTCTCGAGgtatcacgat ... gaatttgcagCATCAGGAGGATGATAACTTCGCCATTGTGTTCGCAGCAATGGGTGTGAAC
EST: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAG CATCAGGAGGATGATAAC
genomic: GTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgat ... gaatttgcagCATCAGGAGGATGATAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTTCTGCCGCAGGTCTTCCCCACAATGAAATTGCTGCTCAGATTTGCCGTCAGGCTGGTTTGGTTAAGCGTTTAGAGAAGTCAGATAATCTTCTCGAGgtatcacgatttatacattactggtccgtgtctacagttggaaattggtttgttacaattataacagtgatcccttagacagttagacatacccattaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT