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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTACCTGTGGAGGACTAGCGGGATCTGCTGCTGCTTTCTTCACAACCCCATTTGATGTAGTAAAAACAAGATTACAAACTCAGgtttgtttctcgtttaggaaccacgttaacaattgtcgtcaacatctaacttatcccatggctgcag

Basic information

species Arabidopsis thaliana
transcript AT4G11440.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT4G11440.1 (Arabidopsis thaliana), 5'ss of exon 7
lower sequence: GLYMA05G37810.1 (Glycine max), 5'ss of exon 7
CTTACCTGTGGAGGACTAGCGGGATCTGCTGCTGCTTTCTTCACAACCCCATTTGATGTAGTAAAAACAAGATTACAAACTCAGgtttgttt----ctcgtttaggaaccacgttaacaattgtcgtcaacatctaacttatcccatggctgcag-------------------------------
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TTAGTGTGTGGAGGATTAGCTGGATCTACGGCTGCTTTATTCACAACCCCTTTTGATGTGATCAAGACTAGATTACAGACACAGgtatgtaataaacatgcccttcaattgtataaattctcattgctacta-ctgaagaataatctgg-tgcagccatctaattagatgtcgaagacaacctttc