1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TAAACTCTTCTTTGAGTCTGTGTGTGGCGAGGTGTACCGTCTGAGGCTACTGGGCGATTATCATCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATGgtaagcaaatacttctgttatctctctttcttccaaccttccatttgtcaactataacgcttatgcattttcattagttaagtatgatcttttcactcttccgcag
species | Arabidopsis thaliana |
transcript | AT4G10610.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATG GCTGAAAGCGCGATAGCGGCTCTCAACTGCAGTGGTGTCCTTCTTGGTTCTEST: gi|164027965|gb|ES179599.1|ES179599
genomic: TCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATGgtaagcaaat ... tcttccgcagGCTGAAAGCGCGATAGCGGCTCTCAACTGCAGTGGTGTCCTTCTTGGTTCT
EST: TGGGCGATTATCATCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATG GCTGAAAGCGCGATAGCGGCTCTCAACT
genomic: TGGGCGATTATCATCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATGgtaagcaaat ... tcttccgcagGCTGAAAGCGCGATAGCGGCTCTCAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAACTCTTCTTTGAGTCTGTGTGTGGCGAGGTGTACCGTCTGAGGCTACTGGGCGATTATCATCATCCAACTCGCATCGGCTTCGTGGAGTTTGTCATGgtaagcaaatacttctgttatctctctttcttccaaccttccatttgtcaactataacgcttatgcattttcattagttaagtatgatcttttcactcttccgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG