1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgctagaagagttaggccttttcccattctagaacatgtcagctgtaaagctggcctttattttatagtgatagtcaacttgatatattctgttgtgttcttttacag
species | Arabidopsis thaliana |
transcript | AT1G67325.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAG ATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACTEST: gi|116485681|gb|EG528273.1|EG528273
genomic: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgcta ... tcttttacagATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACT
EST: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAG ATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACTEST: gi|116485680|gb|EG528272.1|EG528272
genomic: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgcta ... tcttttacagATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACT
EST: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAG ATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACTEST: gi|116475625|gb|EG518217.1|EG518217
genomic: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgcta ... tcttttacagATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACT
EST: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAG ATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACT
genomic: ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgcta ... tcttttacagATTCAACTCGCGATAATGATTGGACATGTCCGAATTGTGGTAATGTAAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCCAAGACCAAGGTTTTACCCAGATGAAAAATCACAAAAGAGAGgtatgtgctagaagagttaggccttttcccattctagaacatgtcagctgtaaagctggcctttattttatagtgatagtcaacttgatatattctgttgtgttcttttacag
- - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - AAGAGA