1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAAGTAGGACTCCCAAGCCAAGTTGCAAGATTTTCAAAAgttagtgacactttgttcttaaaagtaatttagcttttaattattactgattatgctcccaataagtttctttttaactacatatgaggaaaacaatatt...
species | Arabidopsis thaliana |
transcript | AT1G28100.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAAGTAGGACTCCCAAGCCAAGTTGCAAGATTTTCAAAA AACATTACTGCAGTCCCAAAACAAAAAAGGGACAGAGCTTTTGGTTTCTTGEST: gi|86081816|gb|DR377575.1|DR377575
genomic: GAAGTAGGACTCCCAAGCCAAGTTGCAAGATTTTCAAAAgttagtgaca ... ttttgaacagAACATTACTGCAGTCCCAAAACAAAAAAGGGACAGAGCTTTTGGTTTCTTG
EST: GACTCCCAAGCCAAGTTGCAAGATTTTCHAAA AACATTACTGCAGTCCCAAAACAAAAAAGGGACAGAGCTTTTGGTTTCTTG
genomic: GACTCCCAAGCCAAGTTGCAAGATTTTCAAAAgttagtgaca ... ttttgaacagAACATTACTGCAGTCCCAAAACAAAAAAGGGACAGAGCTTTTGGTTTCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGTAGGACTCCCAAGCCAAGTTGCAAGATTTTCAAAAgttagtgacactttgttcttaaaagtaatttagcttttaattattactgattatgctcccaataagtttctttttaactacatatgaggaaaacaatatt
- - - - - - - - - - - - GCAAGA