1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattactactctctgtggccatattatccatgttgcatgtaatttgtggttcaacttctgttctttgttgtttgatggtcgtttctggtatgcctaa...
species | Arabidopsis thaliana |
transcript | AT1G09210.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AACCCCAACTACAAGGGCAAGTGGGAGGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATAEST: gi|124838986|gb|EH923425.1|EH923425
genomic: AACCCCAACTACAAGGGCAAGTGGGA-GGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATA
EST: AAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGEST: gi|164046547|gb|ES089054.1|ES089054
genomic: AAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
EST: AACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGEST: gi|116393133|gb|EG435725.1|EG435725
genomic: AACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
EST: GAACCCCGACTACAATGGCAAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGEST: gi|116412926|gb|EG455518.1|EG455518
genomic: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
EST: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGEST: gi|86078431|gb|DR374188.1|DR374188
genomic: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
EST: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGEST: gi|116412928|gb|EG455520.1|EG455520
genomic: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
EST: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTG ACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
genomic: GAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattact ... attaccgcagACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCCTGgtacattactactctctgtggccatattatccatgttgcatgtaatttgtggttcaacttctgttctttgttgtttgatggtcgtttctggtatgcctaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctactctc