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GAGCTATCATCAGACTCTTCTCAGCATGTCAGATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGgtaagagagtttgcaaacagagatgtgttggttcataatgcacaaattcattttagcatcttaatgattatgactatgtccaactgtttttcgtcctgat...
species | Arabidopsis thaliana |
transcript | AT3G25800.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAG GATGCAACAATTGAGCATCTCCTTCCAATCTTEST: gi|164131740|gb|EL975680.1|EL975680
genomic: ATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGgtaagagagt ... tctattttagGATGCAACAATTGAGCATCTCCTTCCAATCTT
EST: GATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAG GATGCAACAATTGEST: gi|86040356|gb|DR336111.1|DR336111
genomic: GATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGgtaagagagt ... tctattttagGATGCAACAATTG
EST: GATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAG GATGCAACAATTGAGGCATCTCCTTCCAATCTTTCTTTCTCTATTTGAAAG
genomic: GATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGgtaagagagt ... tctattttagGATGCAACAATTGAG-CATCTCCTTCCAATCTTTCTTTCTCTATT-GAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCTATCATCAGACTCTTCTCAGCATGTCAGATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGgtaagagagtttgcaaacagagatgtgttggttcataatgcacaaattcattttagcatcttaatgattatgactatgtccaactgtttttcgtcctgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaacaga