1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATAGTCATACTCCCTTTGCTATTTGCAGCTCTTGTCGGCATTTCCCGTGTTGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttcactctctagtcacaaaggtcaaaactttttccctttaaacatcattcaaaacttataccattgtctgaaaccgcag
species | Arabidopsis thaliana |
transcript | AT3G02600.5 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAG GTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATCEST: gi|86083857|gb|DR379616.1|DR379616
genomic: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttc ... gaaaccgcagGTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
EST: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAG GTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATCEST: gi|86075359|gb|DR371116.1|DR371116
genomic: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttc ... gaaaccgcagGTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
EST: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAG GTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATCEST: gi|86083368|gb|DR379127.1|DR379127
genomic: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttc ... gaaaccgcagGTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
EST: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAG GTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATCEST: gi|86075218|gb|DR370975.1|DR370975
genomic: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttc ... gaaaccgcagGTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
EST: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAG GTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
genomic: TGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttc ... gaaaccgcagGTCTTGCGATCTCTACAATCTGTTATCTTCAATTTTTCCCGCCACCATATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGTCATACTCCCTTTGCTATTTGCAGCTCTTGTCGGCATTTCCCGTGTTGATGACTATTGGCATCATTGGCAAGACGTCTTTGCAGGAGGCTTGCTAGgtttgttttcactctctagtcacaaaggtcaaaactttttccctttaaacatcattcaaaacttataccattgtctgaaaccgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA