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GTCATGCACATTGCAGCTGCAACCGAGATTAATTCGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAGgtctgacttttttcttgctccttcttaagtgacacacttgatctagtcgctaaactgcaacacaagactctttaaaaataaaacttgctctgacctctat...
species | Arabidopsis thaliana |
transcript | AT2G47510.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAG TCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGATEST: gi|116457541|gb|EG500133.1|EG500133
genomic: CGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAGgtctgacttt ... tttctggcagTCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGAT
EST: CGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAG TCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGATEST: gi|164221850|gb|ES060710.1|ES060710
genomic: CGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAGgtctgacttt ... tttctggcagTCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGAT
EST: CTTTGCATAGCACTTTGGAATCTAAG TCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGAT
genomic: CTTTGCATAGCACTTTGGAATCTAAGgtctgacttt ... tttctggcagTCCTTCGAGTTCAAAGATATTGTGAAAATTGGAAGAACTCACACTCAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATGCACATTGCAGCTGCAACCGAGATTAATTCGAGGCTCATCCCTAGTTTAAAAACTTTGCATAGCACTTTGGAATCTAAGgtctgacttttttcttgctccttcttaagtgacacacttgatctagtcgctaaactgcaacacaagactctttaaaaataaaacttgctctgacctctat
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