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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTTGGTTTCGTGTCAATGAGCAGCTTCCTGCTAATTTACAGAAATCATTACCGGATCGACCACCTGAAATGCAATCTACTGGAGTCCATGATGgtatagtgaataaaacctattttggatagcttctcaaagaaagatgtgatttcttttgatccttatgaattttgacag

Basic information

species Arabidopsis thaliana
transcript AT2G32850.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT2G32850.2 (Arabidopsis thaliana), 5'ss of exon 6
lower sequence: GLYMA15G42460.1 (Glycine max), 5'ss of exon 7
ATTTGGTTTCGTGTCAATGAGCAGCTTCCTGCTAATTTACAGAAATCATTACCGGATCGACCACCTGAAATGCAATCTACTGGAGTCCATGATGgt-atagtgaataaaacctattttggatagcttctcaaagaaagatgtgatttcttttgatccttatgaattttgacag---------------------------------------------------------
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GTCTGGTTTCGTGTTAATGAGCAACTACCTATTAATTTACAGAAGTCGTTACCTGACAGACCACCTGAATCGCCCTCATCTAACAATCATGAAGgtgatacaaaata----ttaccctagata-----tgaattaaacacctaatttctttgcataagtcagaagattggagttgtatatacaatttttttccttactgagaaaattgatccattgctatatttctgcag