1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTCTTGCATCAAAAAGGCCTTATATCTTCCTCCTCGGTCTATGCTCTTATTATCCGGTGAAGCACGATATGCTTGGAATCACTACATTCCACATCACAAGgttggtattcttcatttcaatctctccttcgctctcgccaggataactcctactgcattctcttccaattgcttaacactgtactgtactctaatag
species | Arabidopsis thaliana |
transcript | AT1G31600.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATATGCTTGGAATCACTACATCCCACATCACAAG ATTGACAAGGTGAAGGATAAAGTGATCAGAAGAAGTTCTAGAAGGGTATCTEST: gi|116473472|gb|EG516064.1|EG516064
genomic: ATATGCTTGGAATCACTACATTCCACATCACAAGgttggtattc ... actctaatagATTGACAAGGTGAAGGATAAAGTGATCAGAAGAAGTTCTAGAAGGGTATCT
EST: TATCCGGTGAAGCACGATATGCTTGGAATCACTACATTCCACATCACAAG ATTGACAAGGTGAAGGATAAAGTGATCAGAAGAAGTTCTAGAAGGG
genomic: TATCCGGTGAAGCACGATATGCTTGGAATCACTACATTCCACATCACAAGgttggtattc ... actctaatagATTGACAAGGTGAAGGATAAAGTGATCAGAAGAAGTTCTAGAAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTTGCATCAAAAAGGCCTTATATCTTCCTCCTCGGTCTATGCTCTTATTATCCGGTGAAGCACGATATGCTTGGAATCACTACATTCCACATCACAAGgttggtattcttcatttcaatctctccttcgctctcgccaggataactcctactgcattctcttccaattgcttaacactgtactgtactctaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC