1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGGACAAAGCTTCGATGCTAGATGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAGgtaacactctcattactctctagagtcgataaaaatcgtgcaaactaataatctaaacacaataatcgccaacag
species | Arabidopsis thaliana |
transcript | AT1G09530.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGCTAGATGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAG ATCATGTCAATGGCGTCTGGTTAEST: gi|125131196|gb|EL173962.1|EL173962
genomic: TGCTAGATGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAGgtaacactct ... tcgccaacagATCATGTCAATGGCGTCTGGTTA
EST: CGAGTATCTCAAGTCACTCCAACTTCAAGTGCAG ATCATGTCAATGGCGTCTGGTTACTATEST: gi|125099345|gb|EL155185.1|EL155185
genomic: CGAGTATCTCAAGTCACTCCAACTTCAAGTGCAGgtaacactct ... tcgccaacagATCATGTCAATGGCGTCTGGTTACTAT
EST: TGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAG ATCATGTCAATGGCGTCTGGTTACTATC
genomic: TGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAGgtaacactct ... tcgccaacagATCATGTCAATGGCGTCTGGTTACTATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGACAAAGCTTCGATGCTAGATGAAGCCATCGAGTATCTCAAGTCACTCCAACTTCAAGTGCAGgtaacactctcattactctctagagtcgataaaaatcgtgcaaactaataatctaaacacaataatcgccaacag
- - - - - - - - - - - TGAAGC