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GTATCAAGAGGCTATCGAGGAAATTACTAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAGgtctgtgatacagagcagttttcgtagttggatttgtttttgagttatggtgacaaaatgtcttgagctggactgaggtctctgtttcagttagaattct...
species | Arabidopsis thaliana |
transcript | AT4G34640.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AATTACTTAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAG GTAGAAACTGTTGATGACTACGATGAATAEST: gi|125150857|gb|EL183289.1|EL183289
genomic: AATTAC-TAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAGgtctgtgata ... ttatacacagGTAGAAACTGTTGATGACTACGATGAATA
EST: AAATTACTAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAG GTAGAAACTGTTGEST: gi|124966640|gb|EL040730.1|EL040730
genomic: AAATTACTAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAGgtctgtgata ... ttatacacagGTAGAAACTGTTG
EST: TGCAGGGATGGCCAAGTTTATCTGCCAAGAG GTAGAAACTGTTGATGACTACGATGAATACTGCCACTATGTTGCTGGGCTT
genomic: TGCAGGGATGGCCAAGTTTATCTGCCAAGAGgtctgtgata ... ttatacacagGTAGAAACTGTTGATGACTACGATGAATACTGCCACTATGTTGCTGGGCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATCAAGAGGCTATCGAGGAAATTACTAGAAGAATGGGTGCAGGGATGGCCAAGTTTATCTGCCAAGAGgtctgtgatacagagcagttttcgtagttggatttgtttttgagttatggtgacaaaatgtcttgagctggactgaggtctctgtttcagttagaattct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gatacaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gacaaaat