1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGTGAGGAAAATCTGCAAAGCCTTGGAAGAGGACTCCTTCAGGCCAGTACTTCACCACTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAGgtgcgtgtccatatacgttttgtgaatgtcagtaataagataattaagtgaacggaaaataatctgtattgtgtgtcatcatgtgaaaattggaacttgg...
species | Arabidopsis thaliana |
transcript | AT3G27090.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAG ACATTGGATCTGCTAGATCTTTGCGAACAAGCTGGTTCTGCATAAGCCGEST: gi|124787296|gb|EH876975.1|EH876975
genomic: CTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAGgtgcgtgtcc ... tttgttgtagACATTGGATCTGCTAGATCTTTGCGAACAAGCTGGTTCTGCATAAGCCG
EST: CTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAG ACATTGGATCTGCTAGATCTTTGCGAACAAGCTGGTTCTGCATAAGCCGAA
genomic: CTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAGgtgcgtgtcc ... tttgttgtagACATTGGATCTGCTAGATCTTTGCGAACAAGCTGGTTCTGCATAAGCCGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGAGGAAAATCTGCAAAGCCTTGGAAGAGGACTCCTTCAGGCCAGTACTTCACCACTATGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCTGAGgtgcgtgtccatatacgttttgtgaatgtcagtaataagataattaagtgaacggaaaataatctgtattgtgtgtcatcatgtgaaaattggaacttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaataa