1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttctatatccagactcgttcttcttcatgtcctcggtaggtaatattttggatttcggattgcag
species | Arabidopsis thaliana |
transcript | AT3G10370.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAG GAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGTTEST: gi|116483425|gb|EG526017.1|EG526017
genomic: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttct ... cggattgcagGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
EST: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAG GAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCTEST: gi|116483421|gb|EG526013.1|EG526013
genomic: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttct ... cggattgcagGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
EST: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAG GAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCTEST: gi|116437589|gb|EG480181.1|EG480181
genomic: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttct ... cggattgcagGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
EST: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAG GAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCTEST: gi|116483428|gb|EG526020.1|EG526020
genomic: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttct ... cggattgcagGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
EST: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAG GAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
genomic: TGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttct ... cggattgcagGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGGCATCCGTTTTTGGAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCATGCCTATGGTTCAATGGCTGACCGAGTTGCCACCATAGCTCAGgtatggttctatatccagactcgttcttcttcatgtcctcggtaggtaatattttggatttcggattgcag
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