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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGCTTTCATCACTCCAAAAGATCGTGTCTCTACCAGACGATACAAATATATACTGCGGCCGTGAAAACACAGCAgtaagttccacgcacataaatactcttaattcacattgttcaactctcttttatatctcctccatgatacag

Basic information

species Arabidopsis thaliana
transcript AT2G43430.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86087156|gb|DR382915.1|DR382915
EST:     TGTYTCTACCAGACGATACAAATATATACTGCGGCCGTGAAAACACAGCA                         GGCAATCTCAAGTTTGCTCTATCCGTAGAACCAAAGAATGAAACTCTTCAG
genomic: TGTCTCTACCAGACGATACAAATATATACTGCGGCCGTGAAAACACAGCAgtaagttcca ... catgatacagGGCAATCTCAAGTTTGCTCTATCCGTAGAACCAAAGAATGAAACTCTTCAG
EST: gi|164127164|gb|ES186482.1|ES186482
EST:     TATATACTGCGGCCGTGAAAACACAGCA                         GGCAATCTCAAGTTTGCTCTATCCGTAGAACCAAAGAATGAAACTCTTCAG
genomic: TATATACTGCGGCCGTGAAAACACAGCAgtaagttcca ... catgatacagGGCAATCTCAAGTTTGCTCTATCCGTAGAACCAAAGAATGAAACTCTTCAG
EST: gi|125208996|gb|EL223950.1|EL223950
EST:     TGTCTCTACCAGACGATACAAATATATACTGCGGCCGTGAAAACACAGCA                         GGCAATCTCAAGT
genomic: TGTCTCTACCAGACGATACAAATATATACTGCGGCCGTGAAAACACAGCAgtaagttcca ... catgatacagGGCAATCTCAAGT